17:54
Linked gene inheritance
Data that suggests two genes are unlinked or linked, and how to calculate recombination fr...
published: 17 Jan 2013
author: BleierBiology
Linked gene inheritance
Linked gene inheritance
Data that suggests two genes are unlinked or linked, and how to calculate recombination frequency (or gene distance on the same chromosome pair) ... I also d...- published: 17 Jan 2013
- views: 648
- author: BleierBiology
9:54
GeneMappingI
This shows how to find out the gene order and map distances for a trihybrid cross. Pardon ...
published: 11 Dec 2010
author: Todd Nickle
GeneMappingI
GeneMappingI
This shows how to find out the gene order and map distances for a trihybrid cross. Pardon my clumsy editing and abrupt transitions. YouTube won't accept clip...- published: 11 Dec 2010
- views: 4067
- author: Todd Nickle
15:24
Salmonella core genome: Genetic distance among 408 Salmonella measured along the genome
The distance between the parts of the Salmonella genome shared by 408 strains in over 50 s...
published: 04 Oct 2013
Salmonella core genome: Genetic distance among 408 Salmonella measured along the genome
Salmonella core genome: Genetic distance among 408 Salmonella measured along the genome
The distance between the parts of the Salmonella genome shared by 408 strains in over 50 serovars (the core genome) was measured in a sliding 5 kb window. Red, yellow, green, blue, and purple indicate increasing divergence from 1% to 10%. The genomes are ordered in a genetic distance tree. Red squares on the diagonal represent groups of strains that are very closely related, typically in the same serovar. Changes in red and yellow off the diagonal represent recombination events that disagree with the genetic distance tree- published: 04 Oct 2013
- views: 4
1:02
Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity
To best illustrate the dynamics of the genetic landscape in Neolithic Central Europe we an...
published: 11 Oct 2013
Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity
Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity
To best illustrate the dynamics of the genetic landscape in Neolithic Central Europe we animated the genetic distance maps, haplogroup frequencies as well as haplotype diversity through time. The timeline covers 4,500 years of prehistory from the late Mesolithic (~6,000 cal BC) to the end of the Early Bronze Age (2,200 cal BC). The timing is proportional to the time elapsed, i.e. the duration of each cultural period. Events A, B1, B2, C and D mark the genetic changes described in the main text, which are also visible in the alternating genetic affinities on the genetic distance maps (darker colors indicate a greater similarity with the respective Neolithic culture). White arrows summarize the underlying vectors in the form of substantially increasing/decreasing and/or newly arriving haplogroups as observed in the bar graphs at the bottom. Colored symbols on the genetic distance maps indicate the sampling location of the respective data and black dotted lines denote the distribution area of each Mittelelbe-Saale culture. - Farming's Tangled European Roots Science 11 October 2013: Vol. 342 no. 6155 pp. 181-182 DOI: 10.1126/science.342.6155.181 http://www.sciencemag.org/content/342/6155/181.summary News and Analysis: Ancient DNA Revolutions are rarely simple, and that holds true for the so-called Neolithic Revolution in Europe, too, according to two papers published in Science this week. On page 257(1), the largest ancient DNA study on this question shows that farming penetrated Europe in a series of fits and starts, leaving few modern Europeans with the genetic signature of the first farmers. Another paper (2), published online, focuses on a single cave and suggests that farmers and foragers lived side by side for centuries. References 1. Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity Science 11 October 2013: Vol. 342 no. 6155 pp. 257-261 DOI: 10.1126/science.1241844 http://www.sciencemag.org/content/342/6155/257.abstract Editor's Summary The Origins of Europeans To investigate the genetic origins of modern Europeans, Brandt et al. (p. 257) (1) examined ancient mitochondrial DNA (mtDNA) and were able to identify genetic differences in 364 Central Europeans spanning the early Neolithic to the Early Bronze Age. Observed changes in mitochondrial haplotypes corresponded with hypothesized human migration across Eurasia and revealed the complexity of the demographic changes and evidence of a Late Neolithic origin for the European mtDNA gene pool. This transect through time reveals four key population events associated with well-known archaeological cultures, which involved genetic influx into Central Europe from various directions at various times. Abstract The processes that shaped modern European mitochondrial DNA (mtDNA) variation remain unclear. The initial peopling by Palaeolithic hunter-gatherers ~42,000 years ago and the immigration of Neolithic farmers into Europe ~8000 years ago appear to have played important roles but do not explain present-day mtDNA diversity. We generated mtDNA profiles of 364 individuals from prehistoric cultures in Central Europe to perform a chronological study, spanning the Early Neolithic to the Early Bronze Age (5500 to 1550 calibrated years before the common era). We used this transect through time to identify four marked shifts in genetic composition during the Neolithic period, revealing a key role for Late Neolithic cultures in shaping modern Central European genetic diversity. (2) 2000 Years of Parallel Societies in Stone Age Central Europe Science October 10 2013 DOI: 10.1126/science.1245049 http://www.sciencemag.org/content/early/2013/10/09/science.1245049 Abstract Debate on the ancestry of Europeans centers on the interplay between Mesolithic foragers and Neolithic farmers. Foragers are generally believed to have disappeared shortly after the arrival of agriculture. To investigate the relation between foragers and farmers, we examined Mesolithic and Neolithic samples from the Blätterhöhle site. Mesolithic mitochondrial DNA sequences were typical of European foragers, whereas the Neolithic sample included additional lineages that are associated with early farmers. However, isotope analyses separate the Neolithic sample into two groups: one with an agriculturalist diet and one with a forager and freshwater fish diet, the latter carrying mitochondrial DNA sequences typical of Mesolithic hunter-gatherers. This indicates that the descendants of Mesolithic people maintained a foraging lifestyle in Central Europe for more than 2000 years after the arrival of farming societies.- published: 11 Oct 2013
- views: 8
2:14
Gene Linkage, Crossing Over, & Mapping
Genes may crossover before segregating. The frequency of crossover gives rise to mapping g...
published: 07 Nov 2011
author: Biomations
Gene Linkage, Crossing Over, & Mapping
Gene Linkage, Crossing Over, & Mapping
Genes may crossover before segregating. The frequency of crossover gives rise to mapping genes on chromosomes. THe larger the mapping distance, the more like...- published: 07 Nov 2011
- views: 29956
- author: Biomations
12:08
Explaining Recombination Frequencies & Linkage Gene Mapping (Part 1)
Mr. Lima reviews gene linkage through chromosomes and how crossing over breaks it, as well...
published: 24 Jan 2012
author: scienceclassisgreat
Explaining Recombination Frequencies & Linkage Gene Mapping (Part 1)
Explaining Recombination Frequencies & Linkage Gene Mapping (Part 1)
Mr. Lima reviews gene linkage through chromosomes and how crossing over breaks it, as well as sources for genetic variation through meiosis. He then explains...- published: 24 Jan 2012
- views: 11681
- author: scienceclassisgreat
13:15
Three Point Cross
This is an example of a three point cross problem with an explanation....
published: 09 Oct 2012
author: DK MCAT PREP
Three Point Cross
Three Point Cross
This is an example of a three point cross problem with an explanation.- published: 09 Oct 2012
- views: 4336
- author: DK MCAT PREP
8:36
cassava diversity
Conservation of genetic resources of crop plants regarded as an urgent priority today whic...
published: 13 May 2012
author: TNAUgenomic
cassava diversity
cassava diversity
Conservation of genetic resources of crop plants regarded as an urgent priority today which requires characterization of the genetic diversity of domesticate...- published: 13 May 2012
- views: 408
- author: TNAUgenomic
5:28
Colony hybridization assay
For more information, log on to-
http://shomusbiology.weebly.com/
Download the study mater...
published: 25 Oct 2013
Colony hybridization assay
Colony hybridization assay
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html DNA-DNA hybridization generally refers to a molecular biology technique that measures the degree of genetic similarity between pools of DNA sequences. It is usually used to determine the genetic distance between two species. When several species are compared that way, the similarity values allow the species to be arranged in a phylogenetic tree; it is therefore one possible approach to carrying out molecular systematics. Charles Sibley and Jon Ahlquist, pioneers of the technique, used DNA-DNA hybridization to examine the phylogenetic relationships of avians (the Sibley-Ahlquist taxonomy) and primates.[1][2] Critics argue that the technique is inaccurate for comparison of closely related species, as any attempt to measure differences between orthologous sequences between organisms is overwhelmed by the hybridization of paralogous sequences within an organism's genome.[3] DNA sequencing and computational comparisons of sequences is now generally the method for determining genetic distance, although the technique is still used in microbiology to help identify bacteria.[4] The DNA of one organism is labeled, then mixed with the unlabeled DNA to be compared against. The mixture is incubated to allow DNA strands to dissociate and reanneal, forming hybrid double-stranded DNA. Hybridized sequences with a high degree of similarity will bind more firmly, and require more energy to separate them: i.e. they separate when heated at a higher temperature than dissimilar sequences, a process known as "DNA melting". To assess the melting profile of the hybridized DNA, the double-stranded DNA is bound to a column and the mixture is heated in small steps. At each step, the column is washed; sequences that melt become single-stranded and wash off the column. The temperatures at which labeled DNA comes off the column reflects the amount of similarity between sequences (and the self-hybridization sample serves as a control). These results are combined to determine the degree of genetic similarity between organisms.- published: 25 Oct 2013
- views: 42
16:11
Salmonella whole genome: Genetic distances among 408 Salmonella measured along the genome
The Typhimurium LT genome was compared to 408 other Salmonella genomes in a sliding 5 kb w...
published: 05 Oct 2013
Salmonella whole genome: Genetic distances among 408 Salmonella measured along the genome
Salmonella whole genome: Genetic distances among 408 Salmonella measured along the genome
The Typhimurium LT genome was compared to 408 other Salmonella genomes in a sliding 5 kb window. 0% to 1.5% divergence is red-orange-yellow-green 1.5% to 15% divergence is green-blue-violet-black. White indicates regions that are present in LT2 but highly divergent or absent from the other genome.- published: 05 Oct 2013
- views: 9
12:42
Determining gene order
This focuses only on gene symbols and how to set up your F1 chromosomes to determine the g...
published: 08 Feb 2012
author: Todd Nickle
Determining gene order
Determining gene order
This focuses only on gene symbols and how to set up your F1 chromosomes to determine the gene order. You can find more instruction like this at http://univer...- published: 08 Feb 2012
- views: 2771
- author: Todd Nickle
6:24
understanding genetic inversions
For an introductory genetics class (BIOL 234, UBC). Two genes on a chromosome of some unde...
published: 24 Sep 2013
understanding genetic inversions
understanding genetic inversions
For an introductory genetics class (BIOL 234, UBC). Two genes on a chromosome of some undefined distance apart are both disrupted by an inversion. One breakpoint affects what regulatory elements influence one gene. The other breakpoint disrupts a coding region of a second gene.- published: 24 Sep 2013
- views: 106
3:14
Laser Genetics ND3P
THE ULTIMATE SELF DEFENSE LASER LIGHT The ND3-P Laser Designator uses advanced green laser...
published: 16 Apr 2013
author: GamoOutdoor
Laser Genetics ND3P
Laser Genetics ND3P
THE ULTIMATE SELF DEFENSE LASER LIGHT The ND3-P Laser Designator uses advanced green laser technology to create true night vision and turns your scoped rifle...- published: 16 Apr 2013
- views: 1735
- author: GamoOutdoor
11:53
I produce that seed myself - MP4
National Institution for Agricultural Research (INIA) of Uruguay, aware that there was no ...
published: 26 Jan 2012
author: planttreaty
I produce that seed myself - MP4
I produce that seed myself - MP4
National Institution for Agricultural Research (INIA) of Uruguay, aware that there was no resistance to bacterial wilt in any of the country's commercial pot...- published: 26 Jan 2012
- views: 80
- author: planttreaty
Vimeo results:
2:03
The Evolution of a Particle System - Genetic Algorithm, Neural Network
A genetic algorithm determines how the particles move.
They are governed by a neural ne...
published: 29 Jan 2011
author: Bill Automata
The Evolution of a Particle System - Genetic Algorithm, Neural Network
A genetic algorithm determines how the particles move.
They are governed by a neural network, that receives as input, the white dots current distances away, the white dots current velocity, and the current velocity of the particle itself.
Each generation the neural networks of the particles that spend the most time near the white dot are averaged, and mutated slightly. Then the new networks replace the old networks in the simulation.
After time the particle system should converge on a solution that emulates basic particle orbit systems.
2:45
65_RedRoses OWN Trailer
65_RedRoses is documentary that takes an unflinching look into the life of Eva Markvoort a...
published: 22 Jun 2011
author: 65_RedRoses
65_RedRoses OWN Trailer
65_RedRoses is documentary that takes an unflinching look into the life of Eva Markvoort as she battles a fatal genetic disease called Cystic Fibrosis (CF). At 23, Eva needs a double lung transplant to live. Unable to be around other patients with the same disease, Eva turns to the internet where she forms a strong connection with two American girls in different stages of CF. As the film follows Eva on her journey to getting new lungs, we witness how her online friendship with Meg and Kina withstands the tests of both time and distance.
2:58
Making of the Beamer Bees
What would a world without bees be like?
The mysterious disappearance of bees have remain...
published: 24 Oct 2009
author: Superflux
Making of the Beamer Bees
What would a world without bees be like?
The mysterious disappearance of bees have remained a source of concern for a long time now. Experts have tried to pin down several reasons which include exposure to genetically modified crops, pesticide poisoning, invasive parasites, malnutrition from pollinating vast tracts of crops with little nourishment, the stress of being moved long distances and growing electromagnetic radiation.
What if we could design and make new kinds of bees that dont disappear? The Beamer Bees are imagined as manufactured synthetic insects that live in harmony with nature. The exist in the fictional town of the future: Acres Green.
For more information visit: http://powerof8.org.uk/?p=569
4:03
Resonating Bodies Prototype
Sample video of a part of an installation I am setting up in the *New* gallery in Toronto....
published: 25 Jun 2008
author: Additv
Resonating Bodies Prototype
Sample video of a part of an installation I am setting up in the *New* gallery in Toronto.
Project Description:
The foraging activities of our bees will be the focus of our
observation. As we know, the collection of pollen is both necessary for the feeding of the bees, and the pollination (and thus reproduction) of the plants and creation of genetic diversity. While this fact is common knowledge, the time scales and distances involved make it difficult for most people to link cause and effect or have first-hand knowledge of the link between bees, plant reproduction and genetic diversity. This part of the project aims to draw a direct causal relation between bee pollination and plant reproduction by both to shrinking the time and distances involved in the process and linking the real-life act of bees collecting pollen with the growth of flowers in virtual/gallery space. To do this, a video camera has been placed at the entry point of the hive so that the comings and goings of the bees will be monitored. By painting the stamens of a variety of plants
in the garden adjacent to the New gallery with florescent dye powders, it is possible to track which plants the bees are collecting pollen from. The camera will be able to tell which plants the bees are pollinating by measuring their colour. These data will trigger the growth of virtual flowers within the gallery space. The form that the Virtual flowers take will be procedurally generated based on the genetic data (DNA sequences) of the plants which are tagged in the garden. A second camera has also been placed to monitor the behaviour of the hive as a whole and can be viewed as a central fixture in the virtual garden.
Youtube results:
2:39
The 'Speed Gene' From the Lab to Racetrack
UCD Innovation video, The 'Speed Gene' From the Lab to Racetrack. "...Equinome a Universit...
published: 12 Jun 2012
author: UCDInnovation
The 'Speed Gene' From the Lab to Racetrack
The 'Speed Gene' From the Lab to Racetrack
UCD Innovation video, The 'Speed Gene' From the Lab to Racetrack. "...Equinome a University College Dublin spin-out company..." In this UCD Innovation video ...- published: 12 Jun 2012
- views: 780
- author: UCDInnovation
9:50
Genetic Recombination and Gene Mapping
In this video Paul Andersen explains how the frequency of recombination between linked gen...
published: 30 Mar 2014
Genetic Recombination and Gene Mapping
Genetic Recombination and Gene Mapping
In this video Paul Andersen explains how the frequency of recombination between linked genes can be used to determine the relative location of genes on a chromosome. Thomas Hunt Morgan and Alfred Strutevant used the fruit fly to develop a theory of chromosomal inheritance and discover crossing over. Do you speak another language? Help me translate my videos: http://www.bozemanscience.com/translations/ Music Attribution Title: String Theory Artist: Herman Jolly http://sunsetvalley.bandcamp.com/track/string-theory All of the images are licensed under creative commons and public domain licensing: "File:Drosophila Repleta Lateral.jpg." Wikipedia, the Free Encyclopedia. Accessed March 13, 2014. http://en.wikipedia.org/wiki/File:Drosophila_repleta_lateral.jpg. "File:Morgan Crossover 1.jpg." Wikipedia, the Free Encyclopedia. Accessed March 13, 2014. http://en.wikipedia.org/wiki/File:Morgan_crossover_1.jpg. "File:Thomas Hunt Morgan.jpg." Wikipedia, the Free Encyclopedia. Accessed March 13, 2014. http://en.wikipedia.org/wiki/File:Thomas_Hunt_Morgan.jpg. "FlyBase," n.d. http://flybase.org/reports/FBgn0003975.html. spax89. Illustration of a Tobacco Pipe, 2009. Extracted from Media:Blason de la ville de Saint-Quentin-la-Poterie (30).svg. http://commons.wikimedia.org/wiki/File:Tobacco_pipe.svg.- published: 30 Mar 2014
- views: 3415
11:14
ILLogical Race Deniers Debunked by Jared Taylor.
Jared Taylor discusses racial differences and their significance. Other facts! Make The Wo...
published: 04 Oct 2012
author: Ebblnm
ILLogical Race Deniers Debunked by Jared Taylor.
ILLogical Race Deniers Debunked by Jared Taylor.
Jared Taylor discusses racial differences and their significance. Other facts! Make The World Flat (Race and Intelligence) LONG VIDEO (see chapter times in d...- published: 04 Oct 2012
- views: 301
- author: Ebblnm
1:54
Tetrapod Evolution - Genetic Neural Networks
Population size: 50
Generation: 1 - 400
Fitness function: distance * speed
Selection:
...
published: 26 Jan 2014
Tetrapod Evolution - Genetic Neural Networks
Tetrapod Evolution - Genetic Neural Networks
Population size: 50 Generation: 1 - 400 Fitness function: distance * speed Selection: - Ranked - Bias 1.7 - Cutoff 0.9 - Elites: 1 Neural network: - 13 Input Neurons (8 kinestetic, 4 touch, 1 balance) - 8 Hidden Neurons - 8 Output Neurons (8 muscle) - 168 Synapses - Neuron bias range: 0 - Synapse weight range: -2, 2 - Activation function: Hyperbolic tangent approximation. Genome: - Mutation rate: 0.007 - Crossover: per bit, random - Gene count: 197 - Gene size: 2 byte - Encoding: Gray coded binary - Gene expression: synapse weight and neuron bias. - Initial state: random Body: - Tetrapod, 4 legged - Variation: Constant Sensors: - kinestetic sense (angle of joints) - balance (angle of body) - touch on the 4 legs Environment: Flat Constant- published: 26 Jan 2014
- views: 56