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Bioinformatics 
i/ˌbaɪ.oʊˌɪnfərˈmætɪks/ is the application of computer science and information technology to the field of biology and medicine. Bioinformatics deals with algorithms, databases and information systems, web technologies, artificial intelligence and soft computing, information and computation theory, software engineering, data mining, image processing, modeling and simulation, signal processing, discrete mathematics, control and system theory, circuit theory, and statistics. Bioinformatics generates new knowledge as well as the computational tools to create that knowledge.
Commonly used software tools and technologies in this field include Java, XML, Perl, C, C++, Python, R, MySQL, SQL, CUDA, MATLAB, and Microsoft Excel.
Bioinformatics was applied in the creation and maintenance of a database to store biological information at the beginning of the "genomic revolution", such as nucleotide sequences and amino acid sequences. Development of this type of database involved not only design issues but the development of complex interfaces whereby researchers could access existing data as well as submit new or revised data.
This page contains text from Wikipedia, the Free Encyclopedia -
http://en.wikipedia.org/wiki/Bioinformatics
This article is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License, which means that you can copy and modify it as long as the entire work (including additions) remains under this license.
This article is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License, which means that you can copy and modify it as long as the entire work (including additions) remains under this license.
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Bioinformatics part 1 What is Bioinformatics
Bioinformatics part 1 What is Bioinformatics -
Introduction to Bioinformatics - Week 1 - Lecture 1
Introduction to Bioinformatics - Week 1 - Lecture 1Introduction to Bioinformatics - Week 1 - Lecture 1
Middle East Technical University OpenCourseWare [ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to Bioinf... -
Bioinformatics: Where Math Meets Molecules
Bioinformatics: Where Math Meets MoleculesBioinformatics: Where Math Meets Molecules
An interview with Lehigh Engineering P.C. Rossin Assistant Professor Dept. of Computer Science Brian Chen. -
Careers in Bioinformatics and Precision Medicine - Career Development Week
Careers in Bioinformatics and Precision Medicine - Career Development WeekCareers in Bioinformatics and Precision Medicine - Career Development Week
Visit: http://www.uctv.tv/) Precision medicine integrates molecular and clinical research with patient data and outcomes, aiming to place the patient at the... -
Bioinformatics part 3 Sequence alignment introduction
Bioinformatics part 3 Sequence alignment introductionBioinformatics part 3 Sequence alignment introduction
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi... -
Python For Bioinformatics and Your First Python for Bioinformatics Program
Python For Bioinformatics and Your First Python for Bioinformatics ProgramPython For Bioinformatics and Your First Python for Bioinformatics Program
For more in-depth Python for Bioinformatics training visit: http://www.howtobioinformatics.com/pythonforBioinformatics Hi and welcome to Python for bioinform... -
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda - An Introduction to Biotechnology and BioinformaticsDaniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity University, introduces the key concepts and breakthroughs in biotechnology... -
Intro to Bioinformatics
Intro to BioinformaticsIntro to Bioinformatics
Short (~17 min) podcast on very basic bioinformatics for medicinal chemistry students. -
BIOINFORMATICS (Official promo video HD)
BIOINFORMATICS (Official promo video HD)BIOINFORMATICS (Official promo video HD)
Find more details here: http://www.filmofon.cz/filmy/ostatni/144#scroll Více zde: http://www.filmofon.cz/filmy/ostatni/144#scroll Written, Edited and Directe... -
Biology, Computers Collide in High-Demand Field of Bioinformatics
Biology, Computers Collide in High-Demand Field of BioinformaticsBiology, Computers Collide in High-Demand Field of Bioinformatics
Dr. Shivas Amin calls bioinformatics a "collision of biology and computers." Students learn how to use computers and skills in math and biology to analyze ge... -
A History of Bioinformatics (in the Year 2039)
A History of Bioinformatics (in the Year 2039)A History of Bioinformatics (in the Year 2039)
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039. -
A Student's Guide to Careers in Bioinformatics
A Student's Guide to Careers in BioinformaticsA Student's Guide to Careers in Bioinformatics
Interested in a career that combines agriculture and computer science? Then consider a career in bioinformatics. Bioinformatics experts grow row after row of... -
Bioinformatics Insight
Bioinformatics InsightBioinformatics Insight
Introduction to bioinformatics with Dr. Steve Jones, Head, Bioinformatics, Genome Sciences Centre, BC Cancer Agency. -
Lecture 1: Introduction to bioinformatics and the course
Lecture 1: Introduction to bioinformatics and the courseLecture 1: Introduction to bioinformatics and the course
Introduction to the course and bioinformatics. Why we do bioinformatics, how it relates to genomics and to the changing modalities of biology.
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Bioinformatics part 1 What is Bioinformatics
Bioinformatics part 1 What is BioinformaticsBioinformatics part 1 What is Bioinformatics
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html Bioin... -
Introduction to Bioinformatics - Week 1 - Lecture 1
Introduction to Bioinformatics - Week 1 - Lecture 1Introduction to Bioinformatics - Week 1 - Lecture 1
Middle East Technical University OpenCourseWare [ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to Bioinf... -
Bioinformatics: Where Math Meets Molecules
Bioinformatics: Where Math Meets MoleculesBioinformatics: Where Math Meets Molecules
An interview with Lehigh Engineering P.C. Rossin Assistant Professor Dept. of Computer Science Brian Chen. -
Careers in Bioinformatics and Precision Medicine - Career Development Week
Careers in Bioinformatics and Precision Medicine - Career Development WeekCareers in Bioinformatics and Precision Medicine - Career Development Week
Visit: http://www.uctv.tv/) Precision medicine integrates molecular and clinical research with patient data and outcomes, aiming to place the patient at the... -
Bioinformatics part 3 Sequence alignment introduction
Bioinformatics part 3 Sequence alignment introductionBioinformatics part 3 Sequence alignment introduction
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi... -
Python For Bioinformatics and Your First Python for Bioinformatics Program
Python For Bioinformatics and Your First Python for Bioinformatics ProgramPython For Bioinformatics and Your First Python for Bioinformatics Program
For more in-depth Python for Bioinformatics training visit: http://www.howtobioinformatics.com/pythonforBioinformatics Hi and welcome to Python for bioinform... -
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda - An Introduction to Biotechnology and BioinformaticsDaniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity University, introduces the key concepts and breakthroughs in biotechnology... -
Intro to Bioinformatics
Intro to BioinformaticsIntro to Bioinformatics
Short (~17 min) podcast on very basic bioinformatics for medicinal chemistry students. -
BIOINFORMATICS (Official promo video HD)
BIOINFORMATICS (Official promo video HD)BIOINFORMATICS (Official promo video HD)
Find more details here: http://www.filmofon.cz/filmy/ostatni/144#scroll Více zde: http://www.filmofon.cz/filmy/ostatni/144#scroll Written, Edited and Directe... -
Biology, Computers Collide in High-Demand Field of Bioinformatics
Biology, Computers Collide in High-Demand Field of BioinformaticsBiology, Computers Collide in High-Demand Field of Bioinformatics
Dr. Shivas Amin calls bioinformatics a "collision of biology and computers." Students learn how to use computers and skills in math and biology to analyze ge... -
A History of Bioinformatics (in the Year 2039)
A History of Bioinformatics (in the Year 2039)A History of Bioinformatics (in the Year 2039)
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039. -
A Student's Guide to Careers in Bioinformatics
A Student's Guide to Careers in BioinformaticsA Student's Guide to Careers in Bioinformatics
Interested in a career that combines agriculture and computer science? Then consider a career in bioinformatics. Bioinformatics experts grow row after row of... -
Bioinformatics Insight
Bioinformatics InsightBioinformatics Insight
Introduction to bioinformatics with Dr. Steve Jones, Head, Bioinformatics, Genome Sciences Centre, BC Cancer Agency. -
Lecture 1: Introduction to bioinformatics and the course
Lecture 1: Introduction to bioinformatics and the courseLecture 1: Introduction to bioinformatics and the course
Introduction to the course and bioinformatics. Why we do bioinformatics, how it relates to genomics and to the changing modalities of biology. -
Lecture 1: Applications of Python in Bioinformatics: Visualizing Protein
Lecture 1: Applications of Python in Bioinformatics: Visualizing ProteinLecture 1: Applications of Python in Bioinformatics: Visualizing Protein
Applications of Python in Bioinformatics: Visualizing Protein. PDB ID: 1QLZ Python 2.7 OS: Ubuntu 14.04 Extra Libraries: Matplotlib, mpl_toolkits, numpy(will help) Code: https://code.activestate.com/recipes/579050-lecture-1-applications-of-python-in-bioinformatics/ For mystery write to me: devashish.das@educept.com ============================================= We at Educept, Bangalore are having a month summer training on: 1. Concepts of Bioinformatics 2. Advance Drug Designing 3. Python for Biologists Contact: Educept, Bangalore, India, Mo. +91-9711950939, +91-9964218681 info@educept.com devashish.das@educept.com http://educept.com -
EMBL-EBI: Celebrating 20 years of bioinformatics
EMBL-EBI: Celebrating 20 years of bioinformaticsEMBL-EBI: Celebrating 20 years of bioinformatics
In 2014, the European Molecular Biology Laboratory (http://www.embl.org) turns 40 and its UK site, the European Bioinformatics Institute (http://www.ebi.ac.uk), turns 20. This film features interviews with people who played a key role in the development of the institute, looking back on a remarkable two decades of growth and discovery and looking forward to whatever the future of science may bring. -
Bioinformatics part 7 How to perform Global alignment 1
Bioinformatics part 7 How to perform Global alignment 1Bioinformatics part 7 How to perform Global alignment 1
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence of functional, structural, or evolutionary relationships between the sequences.[1] Aligned sequences of nucleotide or amino acid residues are typically represented as rows within a matrix. Gaps are inserted between the residues so that identical or similar characters are aligned in successive columns. Global alignments, which attempt t -
Understanding Bioinformatics: Finding the Biology in a List of Genes
Understanding Bioinformatics: Finding the Biology in a List of GenesUnderstanding Bioinformatics: Finding the Biology in a List of Genes
This tutorial uses a crime solving analogy to explain how bioinformatics can be used to find the relevant biology in a list of genes. Topics covered include identifying biological functions, pathways, networks and upstream regulators in a list of suspect genes/proteins. -
Bioinformatics part 4 Introduction to FASTA and BLAST
Bioinformatics part 4 Introduction to FASTA and BLASTBioinformatics part 4 Introduction to FASTA and BLAST
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi... -
Bioinformatics Career Overview
Bioinformatics Career OverviewBioinformatics Career Overview
A brief overview of Bioinformatics career opportunities brought to you by the University of South Dakota Computer Science Department. -
Introduction to Bioinformatics
Introduction to BioinformaticsIntroduction to Bioinformatics
What is Bioinformatics? How does it interface with high throughput sequencing? -
專訪世界生物信息之父 （Father of Bioinformatics）- 林華安博士 (Dr. Hwa A. Lim)：「 生物信息學的形成 」，《趙慧娟會客室》
專訪世界生物信息之父 （Father of Bioinformatics）- 林華安博士 (Dr. Hwa A. Lim)：「 生物信息學的形成 」，《趙慧娟會客室》專訪世界生物信息之父 （Father of Bioinformatics）- 林華安博士 (Dr. Hwa A. Lim)：「 生物信息學的形成 」，《趙慧娟會客室》
專訪世界生物信息之父 - (Interview of Father of Bioinformactics) 林華安博士： (Dr. Hwa A. Lim) 「生物信息學的形成」， (The Rise of Bioinformatics) 《趙慧娟會客室》，新城中文電台， 美國舊金山， San Francisco, California, USA 星期二， 2012年05月22日。 www.dtrends.com/Bioinfo_Hal.html www.facebook.com/Bioinformatics001/photos_albums -
Bioinformatics Fundamentals
Bioinformatics FundamentalsBioinformatics Fundamentals
A video from the University of South Dakota Computer Science Department on the fundamentals of Bioinformatics.
Bioinformatics part 1 What is Bioinformatics
- Order: Reorder
- Duration: 10:58
- Updated: 02 Sep 2014
- author: Suman Bhattacharjee
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html Bioin...
wn.com/Bioinformatics Part 1 What Is Bioinformatics
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html Bioin...
- published: 29 Oct 2013
- views: 8627
- author: Suman Bhattacharjee
Introduction to Bioinformatics - Week 1 - Lecture 1
- Order: Reorder
- Duration: 51:07
- Updated: 03 Sep 2014
- author: METUOpenCourseWare
Middle East Technical University OpenCourseWare [ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to Bioinf...
wn.com/Introduction To Bioinformatics Week 1 Lecture 1
Middle East Technical University OpenCourseWare [ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to Bioinf...
- published: 29 Mar 2013
- views: 15590
- author: METUOpenCourseWare
Bioinformatics: Where Math Meets Molecules
- Order: Reorder
- Duration: 3:12
- Updated: 21 Aug 2014
- author: Lehigh Engineering
An interview with Lehigh Engineering P.C. Rossin Assistant Professor Dept. of Computer Science Brian Chen.
wn.com/Bioinformatics Where Math Meets Molecules
An interview with Lehigh Engineering P.C. Rossin Assistant Professor Dept. of Computer Science Brian Chen.
- published: 29 Oct 2013
- views: 512
- author: Lehigh Engineering
Careers in Bioinformatics and Precision Medicine - Career Development Week
- Order: Reorder
- Duration: 51:59
- Updated: 18 Aug 2014
- author: University of California Television (UCTV)
Visit: http://www.uctv.tv/) Precision medicine integrates molecular and clinical research with patient data and outcomes, aiming to place the patient at the...
wn.com/Careers In Bioinformatics And Precision Medicine Career Development Week
Visit: http://www.uctv.tv/) Precision medicine integrates molecular and clinical research with patient data and outcomes, aiming to place the patient at the...
- published: 19 May 2014
- views: 1509
- author: University of California Television (UCTV)
Bioinformatics part 3 Sequence alignment introduction
- Order: Reorder
- Duration: 20:09
- Updated: 02 Sep 2014
- author: Suman Bhattacharjee
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi...
wn.com/Bioinformatics Part 3 Sequence Alignment Introduction
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi...
- published: 29 Oct 2013
- views: 7918
- author: Suman Bhattacharjee
Python For Bioinformatics and Your First Python for Bioinformatics Program
- Order: Reorder
- Duration: 18:51
- Updated: 30 Aug 2014
- author: Blake Allen
For more in-depth Python for Bioinformatics training visit: http://www.howtobioinformatics.com/pythonforBioinformatics Hi and welcome to Python for bioinform...
wn.com/Python For Bioinformatics And Your First Python For Bioinformatics Program
For more in-depth Python for Bioinformatics training visit: http://www.howtobioinformatics.com/pythonforBioinformatics Hi and welcome to Python for bioinform...
- published: 28 Mar 2013
- views: 6071
- author: Blake Allen
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
- Order: Reorder
- Duration: 84:14
- Updated: 03 Sep 2014
- author: Singularity University
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity University, introduces the key concepts and breakthroughs in biotechnology...
wn.com/Daniel Reda An Introduction To Biotechnology And Bioinformatics
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity University, introduces the key concepts and breakthroughs in biotechnology...
- published: 21 Dec 2009
- views: 49173
- author: Singularity University
Intro to Bioinformatics
- Order: Reorder
- Duration: 17:22
- Updated: 30 Jul 2013
- author: Bob Gotwals
Short (~17 min) podcast on very basic bioinformatics for medicinal chemistry students.
wn.com/Intro To Bioinformatics
Short (~17 min) podcast on very basic bioinformatics for medicinal chemistry students.
- published: 29 Mar 2012
- views: 1003
- author: Bob Gotwals
BIOINFORMATICS (Official promo video HD)
- Order: Reorder
- Duration: 2:32
- Updated: 24 Feb 2014
- author: FILMOFONtube
Find more details here: http://www.filmofon.cz/filmy/ostatni/144#scroll Více zde: http://www.filmofon.cz/filmy/ostatni/144#scroll Written, Edited and Directe...
wn.com/Bioinformatics (Official Promo Video Hd)
Find more details here: http://www.filmofon.cz/filmy/ostatni/144#scroll Více zde: http://www.filmofon.cz/filmy/ostatni/144#scroll Written, Edited and Directe...
- published: 07 Nov 2012
- views: 481
- author: FILMOFONtube
Biology, Computers Collide in High-Demand Field of Bioinformatics
- Order: Reorder
- Duration: 2:49
- Updated: 26 Apr 2014
- author: StThomasHouston
Dr. Shivas Amin calls bioinformatics a "collision of biology and computers." Students learn how to use computers and skills in math and biology to analyze ge...
wn.com/Biology, Computers Collide In High Demand Field Of Bioinformatics
Dr. Shivas Amin calls bioinformatics a "collision of biology and computers." Students learn how to use computers and skills in math and biology to analyze ge...
- published: 24 Apr 2014
- views: 655
- author: StThomasHouston
A History of Bioinformatics (in the Year 2039)
- Order: Reorder
- Duration: 57:08
- Updated: 25 Aug 2014
- author: NextDayVideo
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039.
wn.com/A History Of Bioinformatics (In The Year 2039)
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039.
- published: 11 Jul 2014
- views: 1372
- author: NextDayVideo
A Student's Guide to Careers in Bioinformatics
- Order: Reorder
- Duration: 6:01
- Updated: 13 Aug 2014
- author: MississippiSoybean
Interested in a career that combines agriculture and computer science? Then consider a career in bioinformatics. Bioinformatics experts grow row after row of...
wn.com/A Student's Guide To Careers In Bioinformatics
Interested in a career that combines agriculture and computer science? Then consider a career in bioinformatics. Bioinformatics experts grow row after row of...
- published: 04 Nov 2013
- views: 504
- author: MississippiSoybean
Bioinformatics Insight
Introduction to bioinformatics with Dr. Steve Jones, Head, Bioinformatics, Genome Sciences Centre, BC Cancer Agency.
wn.com/Bioinformatics Insight
Introduction to bioinformatics with Dr. Steve Jones, Head, Bioinformatics, Genome Sciences Centre, BC Cancer Agency.
- published: 07 Oct 2010
- views: 11166
- author: Genome BC
Lecture 1: Introduction to bioinformatics and the course
- Order: Reorder
- Duration: 47:30
- Updated: 09 Jan 2015
Introduction to the course and bioinformatics. Why we do bioinformatics, how it relates to genomics
and to the changing modalities of biology.
wn.com/Lecture 1 Introduction To Bioinformatics And The Course
Introduction to the course and bioinformatics. Why we do bioinformatics, how it relates to genomics
and to the changing modalities of biology.
- published: 09 Jan 2015
- views: 0
Lecture 1: Applications of Python in Bioinformatics: Visualizing Protein
- Order: Reorder
- Duration: 9:43
- Updated: 28 Apr 2015
Applications of Python in Bioinformatics: Visualizing Protein.
PDB ID: 1QLZ
Python 2.7
OS: Ubuntu 14.04
Extra Libraries: Matplotlib, mpl_toolkits, numpy(will help)
Code: https://code.activestate.com/recipes/579050-lecture-1-applications-of-python-in-bioinformatics/
For mystery write to me: devashish.das@educept.com
=============================================
We at Educept, Bangalore are having a month summer training on:
1. Concepts of Bioinformatics
2. Advance Drug Designing
3. Python for Biologists
Contact:
Educept,
Bangalore,
India,
Mo. +91-9711950939, +91-9964218681
info@educept.com
devashish.das@educept.com
http://educept.com
wn.com/Lecture 1 Applications Of Python In Bioinformatics Visualizing Protein
Applications of Python in Bioinformatics: Visualizing Protein.
PDB ID: 1QLZ
Python 2.7
OS: Ubuntu 14.04
Extra Libraries: Matplotlib, mpl_toolkits, numpy(will help)
Code: https://code.activestate.com/recipes/579050-lecture-1-applications-of-python-in-bioinformatics/
For mystery write to me: devashish.das@educept.com
=============================================
We at Educept, Bangalore are having a month summer training on:
1. Concepts of Bioinformatics
2. Advance Drug Designing
3. Python for Biologists
Contact:
Educept,
Bangalore,
India,
Mo. +91-9711950939, +91-9964218681
info@educept.com
devashish.das@educept.com
http://educept.com
- published: 28 Apr 2015
- views: 287
EMBL-EBI: Celebrating 20 years of bioinformatics
- Order: Reorder
- Duration: 19:19
- Updated: 08 Sep 2014
In 2014, the European Molecular Biology Laboratory (http://www.embl.org) turns 40 and its UK site, the European Bioinformatics Institute (http://www.ebi.ac.uk), turns 20. This film features interviews with people who played a key role in the development of the institute, looking back on a remarkable two decades of growth and discovery and looking forward to whatever the future of science may bring.
wn.com/Embl Ebi Celebrating 20 Years Of Bioinformatics
In 2014, the European Molecular Biology Laboratory (http://www.embl.org) turns 40 and its UK site, the European Bioinformatics Institute (http://www.ebi.ac.uk), turns 20. This film features interviews with people who played a key role in the development of the institute, looking back on a remarkable two decades of growth and discovery and looking forward to whatever the future of science may bring.
- published: 08 Sep 2014
- views: 9
Bioinformatics part 7 How to perform Global alignment 1
- Order: Reorder
- Duration: 35:13
- Updated: 29 Oct 2013
For more information, log on to-
http://shomusbiology.weebly.com/
Download the study materials here-
http://shomusbiology.weebly.com/bio-materials.html
In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence of functional, structural, or evolutionary relationships between the sequences.[1] Aligned sequences of nucleotide or amino acid residues are typically represented as rows within a matrix. Gaps are inserted between the residues so that identical or similar characters are aligned in successive columns.
Global alignments, which attempt to align every residue in every sequence, are most useful when the sequences in the query set are similar and of roughly equal size. (This does not mean global alignments cannot end in gaps.) A general global alignment technique is the Needleman--Wunsch algorithm, which is based on dynamic programming. Local alignments are more useful for dissimilar sequences that are suspected to contain regions of similarity or similar sequence motifs within their larger sequence context. The Smith--Waterman algorithm is a general local alignment method also based on dynamic programming.
Hybrid methods, known as semiglobal or "glocal" (short for global-local) methods, attempt to find the best possible alignment that includes the start and end of one or the other sequence. This can be especially useful when the downstream part of one sequence overlaps with the upstream part of the other sequence. In this case, neither global nor local alignment is entirely appropriate: a global alignment would attempt to force the alignment to extend beyond the region of overlap, while a local alignment might not fully cover the region of overlap.[5] Another case where semiglobal alignment is useful is when one sequence is short (for example a gene sequence) and the other is very long (for example a chromosome sequence). In that case, the short sequence should be globally aligned but only a local alignment is desired for the long sequence. Source of the article published in description is Wikipedia. I am sharing their material. Copyright by original content developers.
Link- http://en.wikipedia.org/wiki/Main_Page
wn.com/Bioinformatics Part 7 How To Perform Global Alignment 1
For more information, log on to-
http://shomusbiology.weebly.com/
Download the study materials here-
http://shomusbiology.weebly.com/bio-materials.html
In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence of functional, structural, or evolutionary relationships between the sequences.[1] Aligned sequences of nucleotide or amino acid residues are typically represented as rows within a matrix. Gaps are inserted between the residues so that identical or similar characters are aligned in successive columns.
Global alignments, which attempt to align every residue in every sequence, are most useful when the sequences in the query set are similar and of roughly equal size. (This does not mean global alignments cannot end in gaps.) A general global alignment technique is the Needleman--Wunsch algorithm, which is based on dynamic programming. Local alignments are more useful for dissimilar sequences that are suspected to contain regions of similarity or similar sequence motifs within their larger sequence context. The Smith--Waterman algorithm is a general local alignment method also based on dynamic programming.
Hybrid methods, known as semiglobal or "glocal" (short for global-local) methods, attempt to find the best possible alignment that includes the start and end of one or the other sequence. This can be especially useful when the downstream part of one sequence overlaps with the upstream part of the other sequence. In this case, neither global nor local alignment is entirely appropriate: a global alignment would attempt to force the alignment to extend beyond the region of overlap, while a local alignment might not fully cover the region of overlap.[5] Another case where semiglobal alignment is useful is when one sequence is short (for example a gene sequence) and the other is very long (for example a chromosome sequence). In that case, the short sequence should be globally aligned but only a local alignment is desired for the long sequence. Source of the article published in description is Wikipedia. I am sharing their material. Copyright by original content developers.
Link- http://en.wikipedia.org/wiki/Main_Page
- published: 29 Oct 2013
- views: 19483
Understanding Bioinformatics: Finding the Biology in a List of Genes
- Order: Reorder
- Duration: 21:31
- Updated: 06 Apr 2015
This tutorial uses a crime solving analogy to explain how bioinformatics can be used to find the relevant biology in a list of genes. Topics covered include identifying biological functions, pathways, networks and upstream regulators in a list of suspect genes/proteins.
wn.com/Understanding Bioinformatics Finding The Biology In A List Of Genes
This tutorial uses a crime solving analogy to explain how bioinformatics can be used to find the relevant biology in a list of genes. Topics covered include identifying biological functions, pathways, networks and upstream regulators in a list of suspect genes/proteins.
- published: 06 Apr 2015
- views: 4
Bioinformatics part 4 Introduction to FASTA and BLAST
- Order: Reorder
- Duration: 14:25
- Updated: 02 Sep 2014
- author: Suman Bhattacharjee
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi...
wn.com/Bioinformatics Part 4 Introduction To Fasta And Blast
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here- http://shomusbiology.weebly.com/bio-materials.html In bi...
- published: 29 Oct 2013
- views: 6562
- author: Suman Bhattacharjee
Bioinformatics Career Overview
- Order: Reorder
- Duration: 4:20
- Updated: 15 Aug 2014
- author: USD Bioinformatics
A brief overview of Bioinformatics career opportunities brought to you by the University of South Dakota Computer Science Department.
wn.com/Bioinformatics Career Overview
A brief overview of Bioinformatics career opportunities brought to you by the University of South Dakota Computer Science Department.
- published: 22 May 2012
- views: 2012
- author: USD Bioinformatics
Introduction to Bioinformatics
- Order: Reorder
- Duration: 2:47
- Updated: 18 Jul 2013
- author: Institute for Genome Sciences
What is Bioinformatics? How does it interface with high throughput sequencing?
wn.com/Introduction To Bioinformatics
What is Bioinformatics? How does it interface with high throughput sequencing?
- published: 19 Oct 2010
- views: 15184
- author: Institute for Genome Sciences
專訪世界生物信息之父 （Father of Bioinformatics）- 林華安博士 (Dr. Hwa A. Lim)：「 生物信息學的形成 」，《趙慧娟會客室》
- Order: Reorder
- Duration: 43:23
- Updated: 04 Aug 2014
專訪世界生物信息之父 -
(Interview of Father of Bioinformactics)
林華安博士：
(Dr. Hwa A. Lim)
「生物信息學的形成」，
(The Rise of Bioinformatics)
《趙慧娟會客室》，新城中文電台，
美國舊金山，
San Francisco, California, USA
星期二， 2012年05月22日。
www.dtrends.com/Bioinfo_Hal.html
www.facebook.com/Bioinformatics001/photos_albums
wn.com/專訪世界生物信息之父 （Father Of Bioinformatics） 林華安博士 (Dr. Hwa A. Lim)：「 生物信息學的形成 」，《趙慧娟會客室》
專訪世界生物信息之父 -
(Interview of Father of Bioinformactics)
林華安博士：
(Dr. Hwa A. Lim)
「生物信息學的形成」，
(The Rise of Bioinformatics)
《趙慧娟會客室》，新城中文電台，
美國舊金山，
San Francisco, California, USA
星期二， 2012年05月22日。
www.dtrends.com/Bioinfo_Hal.html
www.facebook.com/Bioinformatics001/photos_albums
- published: 04 Aug 2014
- views: 31
Bioinformatics Fundamentals
- Order: Reorder
- Duration: 8:50
- Updated: 11 Jul 2013
- author: USD Bioinformatics
A video from the University of South Dakota Computer Science Department on the fundamentals of Bioinformatics.
wn.com/Bioinformatics Fundamentals
A video from the University of South Dakota Computer Science Department on the fundamentals of Bioinformatics.
- published: 22 May 2012
- views: 424
- author: USD Bioinformatics
- Playlist
- Chat
10:58
Bioinformatics part 1 What is Bioinformatics
For more information, log on to- http://shomusbiology.weebly.com/ Download the study mater...
published: 29 Oct 2013
author: Suman Bhattacharjee
Bioinformatics part 1 What is Bioinformatics
Bioinformatics part 1 What is Bioinformatics
- published: 29 Oct 2013
- views: 8627
- author: Suman Bhattacharjee
51:07
Introduction to Bioinformatics - Week 1 - Lecture 1
Middle East Technical University OpenCourseWare [ http://ocw.metu.edu.tr ] Course Title: I...
published: 29 Mar 2013
author: METUOpenCourseWare
Introduction to Bioinformatics - Week 1 - Lecture 1
Introduction to Bioinformatics - Week 1 - Lecture 1
- published: 29 Mar 2013
- views: 15590
- author: METUOpenCourseWare
3:12
Bioinformatics: Where Math Meets Molecules
An interview with Lehigh Engineering P.C. Rossin Assistant Professor Dept. of Computer Sci...
published: 29 Oct 2013
author: Lehigh Engineering
Bioinformatics: Where Math Meets Molecules
Bioinformatics: Where Math Meets Molecules
- published: 29 Oct 2013
- views: 512
- author: Lehigh Engineering
51:59
Careers in Bioinformatics and Precision Medicine - Career Development Week
Visit: http://www.uctv.tv/) Precision medicine integrates molecular and clinical research ...
published: 19 May 2014
Careers in Bioinformatics and Precision Medicine - Career Development Week
Careers in Bioinformatics and Precision Medicine - Career Development Week
- published: 19 May 2014
- views: 1509
- author: University of California Television (UCTV)
20:09
Bioinformatics part 3 Sequence alignment introduction
For more information, log on to- http://shomusbiology.weebly.com/ Download the study mater...
published: 29 Oct 2013
author: Suman Bhattacharjee
Bioinformatics part 3 Sequence alignment introduction
Bioinformatics part 3 Sequence alignment introduction
- published: 29 Oct 2013
- views: 7918
- author: Suman Bhattacharjee
18:51
Python For Bioinformatics and Your First Python for Bioinformatics Program
For more in-depth Python for Bioinformatics training visit: http://www.howtobioinformatics...
published: 28 Mar 2013
author: Blake Allen
Python For Bioinformatics and Your First Python for Bioinformatics Program
Python For Bioinformatics and Your First Python for Bioinformatics Program
- published: 28 Mar 2013
- views: 6071
- author: Blake Allen
84:14
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda, co-Chair of the Biotechnology and Bioinformatics track at Singularity Univers...
published: 21 Dec 2009
author: Singularity University
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
Daniel Reda - An Introduction to Biotechnology and Bioinformatics
- published: 21 Dec 2009
- views: 49173
- author: Singularity University
17:22
Intro to Bioinformatics
Short (~17 min) podcast on very basic bioinformatics for medicinal chemistry students....
published: 29 Mar 2012
author: Bob Gotwals
Intro to Bioinformatics
Intro to Bioinformatics
- published: 29 Mar 2012
- views: 1003
- author: Bob Gotwals
2:32
BIOINFORMATICS (Official promo video HD)
Find more details here: http://www.filmofon.cz/filmy/ostatni/144#scroll Více zde: http://w...
published: 07 Nov 2012
author: FILMOFONtube
BIOINFORMATICS (Official promo video HD)
BIOINFORMATICS (Official promo video HD)
- published: 07 Nov 2012
- views: 481
- author: FILMOFONtube
2:49
Biology, Computers Collide in High-Demand Field of Bioinformatics
Dr. Shivas Amin calls bioinformatics a "collision of biology and computers." Students lear...
published: 24 Apr 2014
author: StThomasHouston
Biology, Computers Collide in High-Demand Field of Bioinformatics
Biology, Computers Collide in High-Demand Field of Bioinformatics
- published: 24 Apr 2014
- views: 655
- author: StThomasHouston
57:08
A History of Bioinformatics (in the Year 2039)
C. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2...
published: 11 Jul 2014
author: NextDayVideo
A History of Bioinformatics (in the Year 2039)
A History of Bioinformatics (in the Year 2039)
- published: 11 Jul 2014
- views: 1372
- author: NextDayVideo
6:01
A Student's Guide to Careers in Bioinformatics
Interested in a career that combines agriculture and computer science? Then consider a car...
published: 04 Nov 2013
author: MississippiSoybean
A Student's Guide to Careers in Bioinformatics
A Student's Guide to Careers in Bioinformatics
- published: 04 Nov 2013
- views: 504
- author: MississippiSoybean
7:06
Bioinformatics Insight
Introduction to bioinformatics with Dr. Steve Jones, Head, Bioinformatics, Genome Sciences...
published: 07 Oct 2010
author: Genome BC
Bioinformatics Insight
Bioinformatics Insight
- published: 07 Oct 2010
- views: 11166
- author: Genome BC
47:30
Lecture 1: Introduction to bioinformatics and the course
Introduction to the course and bioinformatics. Why we do bioinformatics, how it relates to...
published: 09 Jan 2015
Lecture 1: Introduction to bioinformatics and the course
Lecture 1: Introduction to bioinformatics and the course
- published: 09 Jan 2015
- views: 0
photo: AP
25 Sep 2015
As the body count from the horrific Hajj stampede reached 719, the backlash started. Within hours, Saudi Arabia's regional rival Iran had laid the blame for the deaths squarely on the heads of the House of Saud. Saudi officials, by contrast, claimed "some pilgrims who didn't follow the guidelines issued" may have been responsible for the sudden crush on the half-mile-long, five-storey Jamarat Bridge near Mecca ... Haj stampede ... READ ALSO ... ....
photo: AP / Muhammed Muheisen
25 Sep 2015
About a third of refugees arriving in Germany who claim to be from Syria are actually not from that country, a spokesman for the German interior ministry has said ... On Thursday, Chancellor Angela Merkel and Germany's 16 state governors agreed on measures designed to streamline the country's handling of the refugee arrivals ... Source. Al Jazeera and agencies. ....
photo: Creative Commons
24 Sep 2015
Black holes typically come in one of two sizes. stellar mass and supermassive. Astronomers believe that there are black holes that fit between these two extremes but finding them has proven difficult, with only a half-dozen candidates currently kno...... ....
photo: Public Domain / NASA, ESA, and The Hubble Heritage Team STScI/AURA)
25 Sep 2015
NASA has released an absolutely beautiful photo taken by the Hubble Space Telescope of the debris of a star that exploded 8,000 years ago. You’re looking at the Veil Nebula, a supernova remnant more than 2,000 light-years away ... Read this next....
photo: AP
24 Sep 2015
The stampede that killed at least 700 people performing the Hajj pilgrimage outside the Islamic holy city of Mecca has once again raised questions over safety and the actions of the Saudi authorities. The Hajj is one of the five pillars of Islam. Every able-bodied Muslim is required to perform it at least once in their lifetime ... It is estimated that two million people are performing this year's Hajj. Communication problems ... Hajj ... 2006 ... ....
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Cal State L.A. announces this year's President’s Distinguished Professor... (California State University, Los Angeles)
Public Technologies25 Sep 2015
(Source. California State University, Los Angeles) ... Zetlin and five other faculty members were recently honored during the 2015 University Convocation ... PRESIDENT'S DISTINGUISHED PROFESSOR. ... Momand teaches courses in introductory chemistry, biochemistry and bioinformatics. He is the graduate advisor in the Department of Chemistry and Biochemistry and also advises students who are earning a minor in bioinformatics and computational biology....
Edit
Public Technologies
25 Sep 2015
(Source. Canisius College) COLEMAN FOUNDATION AWARDS FACULTY ENTREPRENEURSHIP GRANT TO KIM. BUFFALO, NY ― Canisius College Associate Professor of Entrepreneurship Ji-Hee Kim, PhD, is the recipient of a one-year $26,000 Faculty Entrepreneurship Fellows Program grant from the Coleman Foundation ... Przemyslaw J ... Debra Burhans, PhD, associate professor of computer science and director of the college's Bioinformatics Program ... Betsy M ... Robert J....
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The Hindu
25 Sep 2015
An administrator praised by Mahatma Gandhi, and an author of a book that Prime Minister Narendra Modi recommends as a must-read for all new IAS officers, stands as a mute spectator to the transformation of Thiruvananthapuram for nearly 150 years. The oldest statue in the city – that of T ... Curiously, the descendent is named A ... (The author is head of the Department of Computational Biology and Bioinformatics, University of Kerala....
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Public Technologies
24 Sep 2015
1, is part of the NIH's National Heart, Lung and Blood Institute, or NHLBI, and will attract 20 participants from around the nation to learn more about bioinformatics and computational genomics for stem cell research ... The NIH defines bioinformatics as research, development or application of information technology, such as computer programs, to analyze, store and manage biological data....
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Business Wire
24 Sep 2015
MCLEAN, Va.--(BUSINESS WIRE)--Perthera, a premier personalized medicine service company, and Thomas Jefferson University today announced a collaboration that will provide Perthera’s advanced, multi-omic, molecularly targeted diagnostics and related bioinformatics services and analysis to cancer patients at Thomas Jefferson University Hospitals facilities and affiliates ... ....
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Public Technologies
24 Sep 2015
(Source. INRA - Institut National de la Recherche Agronomique). Slim, healthy individuals living in the same geographical region of France were followed for eight weeks at the Rhône-Alpes Centre for Research in Human Nutrition in Grenoble ... it enables the sharing of all study data and of the computerised codes used to carry out bioinformatics and statistical analyses, thus enabling the complete traceability of this work. distributed by....
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Public Technologies
24 Sep 2015
(Source. University of Michigan). ANN ARBOR-Buried in troves of data that scientists have gathered, but not yet analyzed, could be key insights to improving cancer treatment, understanding Alzheimer's, predicting climate change effects and developing cheaper, clean energy technologies ... "VARI's Bioinformatics and Biostatistics Core receives data produced ... Mary Winn, manager of VARI's Bioinformatics and Biostatistics Core ... (noodl....
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Yahoo Daily News
24 Sep 2015
Companies across numerous industries can simply provide their samples for analysis and receive relevant and extensive data very rapidly, and also receive help with data mining and bioinformatics services - a value proposition that could revolutionize preclinical drug research, biomarker discovery, and diagnostics....
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Public Technologies
24 Sep 2015
(Source. Virginia Tech - Virginia Polytechnic Institute and State University). ROANOKE, Va., Sept ... 1. Scarred for Life ... The Oct ... 29-Oct. 2 in Roanoke ... As part of the Oct ... 23 ... The Virginia Tech Carilion School of Medicine and Research Institute joins the basic science, life science, bioinformatics, and engineering strengths of Virginia Tech with the medical practice and medical education experience of Carilion Clinic ... Written by Catherine Doss....
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Public Technologies
24 Sep 2015
(Source. UTD - The University of Texas at Dallas). Sept ... He graduated from UT Dallas in May with a degree in biochemistry. UT Dallas alumnus Raheel Ata BS'15 knew he wanted to someday work in the medical field ... Ata, who is focusing on bioengineering and bioinformatics this fall at Stanford University Medical School, was recognized for his dedication to the intersection of medicine and technology with a $5,000 Phi Kappa Phi Fellowship....
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Professor Szpankowski honored with Purdue's inaugural 2015 Arden L. Bement Jr. Award (Purdue University)
Public Technologies24 Sep 2015
(Source. Purdue University) September 24, 2015. WEST LAFAYETTE, Ind ... Bement Jr. Award ... This award, announced Thursday (Sept ... "Professor Szpankowski is a visionary ... Bement Jr ... His research interests include the analysis and design of algorithms, information theory including multimedia compression, random structures, analytic combinatorics, bioinformatics, performance evaluation, networking, and stability problems in distributed systems....
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Early-career awards fast track researcher’s studies on poverty and health (Stanford School of Medicine)
Public Technologies24 Sep 2015
(Source. Stanford School of Medicine). Rita Hamad is using grants from Spectrum to help build her skills for interpreting large health, economic and insurance data sets ... Norbert von der Groeben ... Second, the program offers participants full tuition support for advanced training in disciplines such as biostatistics, epidemiology, study design, genetics, bioinformatics and bioethics ... Gathering evidence for policymakers ... 30 ... distributed by....
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